Repository of molecular dynamics simulations
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605 simulations
Dynarepo 6HER
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
Antigen from Zhao test set, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 6HERPublished 22 Jul 2025Dynarepo 5ZUF
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
Antigen from Zhao test set, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 5ZUFPublished 22 Jul 2025Dynarepo 4ETP
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4ETPPublished 20 Jul 2025Dynarepo 5TIH
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 5TIHPublished 19 Jul 2025Dynarepo 5J57
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 5J57Published 19 Jul 2025Dynarepo 4ZRJ
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4ZRJPublished 19 Jul 2025Dynarepo 4ZGY
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4ZGYPublished 19 Jul 2025Dynarepo 4YEB
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4YEBPublished 19 Jul 2025Dynarepo 4YC7
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4YC7Published 19 Jul 2025Dynarepo 4Y61
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4Y61Published 19 Jul 2025Dynarepo 4XL5
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4XL5Published 19 Jul 2025Dynarepo 4X33
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4X33Published 19 Jul 2025Dynarepo 4V0O
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4V0OPublished 19 Jul 2025Dynarepo 4M0W
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4M0WPublished 19 Jul 2025Dynarepo 4LVN
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4LVNPublished 19 Jul 2025Dynarepo 4HDO
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4HDOPublished 19 Jul 2025Dynarepo 4FZV
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4FZVPublished 19 Jul 2025Dynarepo 4ETP
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4ETPPublished 19 Jul 2025Dynarepo 4DVG
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4DVGPublished 19 Jul 2025Dynarepo 4C9B
Omid Mokhtari, Hamed Khakzad, Yasaman Karami
single chains from test53, Classical MD simulations, 3 replicates of 500 ns
OpenPDB 4C9BPublished 19 Jul 2025