Folding@home simulations of nucleoprotein DD dimer

Open

Maxwell I. Zimmerman;

MD-A001US

Created: 15 Feb 2023
License: This trajectory dataset is released under a Creative Commons Attribution 4.0 International Public License (opens in a new tab)

Description

Markov state model built from aggregate simulation time collected on Folding@home. Folding@home simulations were launched from the structures generated using an adaptive sampling method (FAST-Pocket).

Molecular system

Sequences

Sequence 1Protein · 118 residues

TKKSAAEASK KPRQKRTATK AYNVTQAFGR RGPEQTQGNF GDQELIRQGT DYKHWPQIAQ FAPSASAFFG MSRIGMEVTP SGTWLTYTGA IKLDDKDPNF KDQVILLNKH IDAYKTFP

Sequence 2Protein · 118 residues

TKKSAAEASK KPRQKRTATK AYNVTQAFGR RGPEQTQGNF GDQELIRQGT DYKHWPQIAQ FAPSASAFFG MSRIGMEVTP SGTWLTYTGA IKLDDKDPNF KDQVILLNKH IDAYKTFP

Run	Outputs
replica 1	Trajectory Analyses

Files

48 files · 286 MB

All files286 MB

trajectory.binBIN
pca_trajectory_01.binBIN
pca_trajectory_02.binBIN
pca_trajectory_03.binBIN
pca_trajectory_04.binBIN
pca_trajectory_05.binBIN
pca_trajectory_06.binBIN
pca_trajectory_07.binBIN
pca_trajectory_08.binBIN
pca_trajectory_09.binBIN

Acknowledgements

We are grateful to the citizen scientists who contribute to Folding@home by running simulations on their personal computers.