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Structure preview of Mg2+-bound human oxytocin receptor bound to oxytocin

Mg2+-bound human oxytocin receptor bound to oxytocin

Open

Francesco Musiani;Samira Al Sadi;Alejandro Giorgetti;Mercedes Alfonso-Prieto;Paolo Carloni;

MD-A00400
Created
6 Feb 2026
License
GNU Lesser General Public License (LGPL), version 2.1 (opens in a new tab)
  • Overview
  • Experiments 3
  • People & affiliations 5

Runs

3
  • 1OTRe replica 110,001 nsNPT
  • 2OTRe replica 210,001 nsNPT
  • 3OTRe replica 310,001 nsNPT

OTRe replica 3NPT

Trajectory

35,002 atomsFull system

Length
10,001 ns @ 2 fs
Frames
10,001 / 1,000 ps
Temperature
304 K
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Analysis

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Parameters

Length
10,001 ns@ 2 fs = 5,000,500,000 steps
Frames
10,0011 frame every 1,000 ps
Ensemble
NPTconstant number of particles, pressure and temperature
Temperature
304 K
Force field
Amber ff14SBwater model TIP3P
Atoms
35,002
Box
9.208 x 9.378 x 12.509 nmTriclinic · 1,080.16 nm³
Composition
  • Total system35,002 atoms · 584 residues
  • Protein5,242 atoms · 325 residues
  • Nucleic acids0 atoms · 0 residues
  • Lipids29,744 atoms · 256 residues
  • Carbohydrates0 atoms · 0 residues
  • Solvent0 atoms · 0 residues
Counter-ions
  • 0Cations (+)
  • 0Anions (-)
  • 0Total ions