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replica 3 | MDBind 5lyy | MDRepo
Records
MDBind 5lyy
Experiments
replica 3
Overview
MD-A007K6
MDBind 5lyy
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Overview
Trajectory viewer
Analyses
Force Field & Water Model
Force field
Amber ff14SB
GAFF
Water model
TIP3P
Simulation Parameters
Frames
50
Frequency
200 ps
Simulation length
10 ns
Timestep
2 fs
Temperature
N/A
Ensemble
N/A
Simulation Box
Box type
N/A
X
7.590 nm
Y
7.868 nm
Z
7.874 nm
Box volume
470.19 nm³
System Composition
Total system
5,967
atoms
372
residues
Protein
5,913
atoms
371
residues
Nucleic acids
0
atoms
0
residues
Lipids
0
atoms
0
residues
Carbohydrates
0
atoms
0
residues
Solvent
0
atoms
Counter-Ions
Cations (+)
0
Anions (-)
0
Total ions
0
0
residues