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replica1 | MD simulations of Mus musculus DNMT1 | MDRepo
Records
MD simulations of Mus musculus DNMT1
Experiments
replica1
Overview
MD-A007L0
MD simulations of Mus musculus DNMT1
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Overview
Trajectory viewer
Analyses
Force Field & Water Model
Force field
ff19SB
Water model
TIP3P
Simulation Parameters
Frames
4,000
Frequency
100 ps
Simulation length
400 ns
Timestep
2 fs
Temperature
300 K
Ensemble
NPT
Simulation Box
Box type
Octahedral
X
N/A
Y
N/A
Z
N/A
Box volume
N/A
System Composition
Total system
19,759
atoms
1,260
residues
Protein
19,755
atoms
1,256
residues
Nucleic acids
0
atoms
0
residues
Lipids
0
atoms
0
residues
Carbohydrates
0
atoms
0
residues
Solvent
0
atoms
Counter-Ions
Cations (+)
0
Anions (-)
0
Total ions
0
0
residues