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Structure preview of mdCATH 1acoA01

mdCATH 1acoA01

Open

Antonio Mirarchi;Toni Giorgino;Gianni De Fabritiis;

MD-A007YU
Created
26 Jan 2026
License
This trajectory is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. (opens in a new tab)
  • Overview
  • Experiments 25
  • People & affiliations 3

Runs

25
  • 1320_rep1440 nsNVT
  • 2320_rep2440 nsNVT
  • 3320_rep3440 nsNVT
  • 4320_rep4440 nsNVT
  • 5320_rep5440 nsNVT
  • 6348_rep1430 nsNVT
  • 7348_rep2430 nsNVT
  • 8348_rep3440 nsNVT
  • 9348_rep4440 nsNVT
  • 10348_rep5440 nsNVT
  • 11379_rep1440 nsNVT
  • 12379_rep2440 nsNVT
  • 13379_rep3440 nsNVT
  • 14379_rep4440 nsNVT
  • 15379_rep5450 nsNVT
  • 16413_rep1440 nsNVT
  • 17413_rep2440 nsNVT
  • 18413_rep3440 nsNVT
  • 19413_rep4440 nsNVT
  • 20413_rep5430 nsNVT
  • 21450_rep1440 nsNVT
  • 22450_rep2440 nsNVT
  • 23450_rep3440 nsNVT
  • 24450_rep4440 nsNVT
  • 25450_rep5440 nsNVT

450_rep1NVT

Trajectory

3,141 atomsFull system

Length
440 ns @ 4 fs
Frames
440 / 1,000 ps
Temperature
450 K
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Analysis

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Parameters

Length
440 ns@ 4 fs = 110,000,000 steps
Frames
4401 frame every 1,000 ps
Ensemble
NVTconstant number of particles, volume and temperature
Temperature
450 K
Force field
CHARMM22*water model TIP3P
Atoms
3,141
Composition
  • Total system3,141 atoms · 201 residues
  • Protein3,141 atoms · 201 residues
  • Lipids0 atoms · 0 residues
  • Carbohydrates0 atoms · 0 residues
  • Solvent0 atoms · 0 residues
Counter-ions
  • 0Cations (+)
  • 0Anions (-)
  • 0Total ions