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Structure preview of mdCATH 1ahsA00

mdCATH 1ahsA00

Open

Antonio Mirarchi;Toni Giorgino;Gianni De Fabritiis;

MD-A007Z0
Created
26 Jan 2026
License
This trajectory is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. (opens in a new tab)
  • Overview
  • Experiments 25
  • People & affiliations 3

Runs

25
  • 1320_rep1440 nsNVT
  • 2320_rep2440 nsNVT
  • 3320_rep3450 nsNVT
  • 4320_rep4440 nsNVT
  • 5320_rep5440 nsNVT
  • 6348_rep1440 nsNVT
  • 7348_rep2440 nsNVT
  • 8348_rep3440 nsNVT
  • 9348_rep4440 nsNVT
  • 10348_rep5440 nsNVT
  • 11379_rep1440 nsNVT
  • 12379_rep2440 nsNVT
  • 13379_rep3450 nsNVT
  • 14379_rep4450 nsNVT
  • 15379_rep5440 nsNVT
  • 16413_rep1450 nsNVT
  • 17413_rep2450 nsNVT
  • 18413_rep3440 nsNVT
  • 19413_rep4450 nsNVT
  • 20413_rep5450 nsNVT
  • 21450_rep1440 nsNVT
  • 22450_rep2450 nsNVT
  • 23450_rep3450 nsNVT
  • 24450_rep4440 nsNVT
  • 25450_rep5430 nsNVT

379_rep3NVT

Trajectory

1,882 atomsFull system

Length
450 ns @ 4 fs
Frames
450 / 1,000 ps
Temperature
379 K
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Analysis

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Parameters

Length
450 ns@ 4 fs = 112,500,000 steps
Frames
4501 frame every 1,000 ps
Ensemble
NVTconstant number of particles, volume and temperature
Temperature
379 K
Force field
CHARMM22*water model TIP3P
Atoms
1,882
Composition
  • Total system1,882 atoms · 126 residues
  • Protein1,882 atoms · 126 residues
  • Lipids0 atoms · 0 residues
  • Carbohydrates0 atoms · 0 residues
  • Solvent0 atoms · 0 residues
Counter-ions
  • 0Cations (+)
  • 0Anions (-)
  • 0Total ions