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  2. Empty LNP (without siRNA), all-atom equilibration MD
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  4. r_4/wh
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MD-A00C7B

Empty LNP (without siRNA), all-atom equilibration MD

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  • r_1/wh
  • r_2/wh
  • r_3/wh
  • r_4/wh
OverviewTrajectory viewerAnalyses

Force Field & Water Model

Force field
  • CHARMM36
Water modelTIP3P

Simulation Parameters

Frames
56
Frequency
N/A
Simulation length
N/A
Timestep
2 fs
Temperature
300 K
Ensemble
NPT

Simulation Box

Box type
  • cubic
X
160.021 nm
Y
160.021 nm
Z
160.021 nm
Box volume
4,097,613.00 nm³

System Composition

Total system
66,204atoms600residues
Protein
0atoms0residues
Nucleic acids
0atoms0residues
Lipids
25,392atoms288residues
Carbohydrates
0atoms0residues
Solvent
0atoms0residues

Counter-Ions

Cations (+)
0
Anions (-)
0
Total ions
0